CDS

Accession Number TCMCG065C27933
gbkey CDS
Protein Id XP_004979135.1
Location join(13620587..13620826,13621124..13621873,13621992..13622188,13622287..13622579,13622702..13622850)
Gene LOC101774274
GeneID 101774274
Organism Setaria italica

Protein

Length 542aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA207554
db_source XM_004979078.4
Definition carotenoid cleavage dioxygenase 8 homolog A, chloroplastic [Setaria italica]

EGGNOG-MAPPER Annotation

COG_category Q
Description Retinal pigment epithelial membrane protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction R10558        [VIEW IN KEGG]
KEGG_rclass RC03187        [VIEW IN KEGG]
RC03188        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K17913        [VIEW IN KEGG]
EC 1.13.11.69        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
1.13.11.70        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
GOs GO:0001763        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006714        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008300        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009914        [VIEW IN EMBL-EBI]
GO:0009926        [VIEW IN EMBL-EBI]
GO:0009965        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010223        [VIEW IN EMBL-EBI]
GO:0010346        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0016042        [VIEW IN EMBL-EBI]
GO:0016106        [VIEW IN EMBL-EBI]
GO:0016108        [VIEW IN EMBL-EBI]
GO:0016110        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016115        [VIEW IN EMBL-EBI]
GO:0016116        [VIEW IN EMBL-EBI]
GO:0016118        [VIEW IN EMBL-EBI]
GO:0016119        [VIEW IN EMBL-EBI]
GO:0016121        [VIEW IN EMBL-EBI]
GO:0016122        [VIEW IN EMBL-EBI]
GO:0016124        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016701        [VIEW IN EMBL-EBI]
GO:0016702        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042214        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042445        [VIEW IN EMBL-EBI]
GO:0042446        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044242        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046247        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051213        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0060918        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901334        [VIEW IN EMBL-EBI]
GO:1901336        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901600        [VIEW IN EMBL-EBI]
GO:1901601        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCGCCTACCACCCTTATCGCCCCATGCTCTGCACTGTTCCTAATGCACCATTCTTGTTATCGGCCTCCACCTCAGGACAGATCTTCCACAATATCAGCATGACTAAGGTACGGCGTATACGATGCGTGAAGGCTGCTCTAGATTGCGGCACCGCCAAGCTTTGTGCCTGGACCAATGTTCAGCGAGAACATTGGGAAGGTGATTTGGCCGTGGAAGGAAACCTCCCTGCTTGGCTGAATGGAACATACCTGAGGAACGGGCCAGGCCTATGGGATGTCGGCGAGCACTCATTCCACCACATTTTCGACGGGTACGCCACACTGGTACGCATCTCCTTCAATCAAGGACGTGCTACCGGCGCACATCGTCTCATCCAGTCGGAGGCATACAAGGCTGCCCGGACGCACGGCCGGCCTCTCCACCGTGAGTTCTCCAGCCTGTGCCCACGCAAGCCAGGGAGCCTGCTCGATCGCGTGCGCAATATCGTTGGGCTCAGCAGCGGCACCGCCCTTTCCGACAACGCCAACGTCTCCGTGCTTCCCCTCGGCGATGGACGGGTGATCTGCCTCACTGAGACCACCAAGAGCTCCGTTTTGATAGACCCGGACACTCTGGACACCATCGGGAAGTTCCATTTCACCGATAGGTTGTGGGGCTTGTTACAGTCCACGCACCCGGTTGTGACACCGACCGAGTTTCTGACGCTGCTCCCGGACCTCTTCCGGCGTGGCCACCGTGTCGTCAGGATGGCTGCAGGGAGCAACGAGAGGAAAGTGCTAGGGAGAGTGCATTGCCGAGGAGGATTGGCACCCGGGTGGGTGCACTCTTTCGCTGTCACTGAGAACTACATTATCGTGCCGGAGATGCCGCTCCGGTACTCGGTCACCGGCGTGCTGAAGTCTGAGCTCACACCATGGTACATCTTCGACTGGGTACCGGAGTCTGGGAGCTACATGCACGTCGTATGCAGGTCCACTGGAAAGACTGTGGCCAGCGTGGAGGTTCCTCCATTCATGGCATTACACTTCATCAACGCATATGAACAGGGAGACGATGACGGCGGGACAGGTGTGATCATCGCTGACTGCTGCGAGTACTATGCTGATCCTGCTATCATCGAGGCACTTGCACTCCATAGGCTAAGATCGCCAGGAATTAACAAGGATGCATTCCCGGATGCCAGGGTAGCCCGGTTCAGGATACCTTTGGATGGAAGTGCCAGGGGCGAGCTGGAGACGGTGGTGGATCCTGACGCGCATGGCCGGGGAGTGGAGTTGTGTTCCATCAACCCAGCCTATCAGGGCAAGGAGTACCGTTACGTTTACGCCTGCGGCGCGCGACGGCCTTGCAACTTCTTCAACTCGCTCACTAAGATCGACCTCGCCGAAAAAGGGGCCAAGAACTGGTATGAGGCGGGCTCTGTGCCATCAGAGCCCTTCTTTGTGGCGAGGCCGGGAGGAACTAATGAGGATGACGGTGTTGTAATATCGATTGTAAGCACCGTAGAAGGTGAAGGTTATGCGCTGGTACTGGACGCAGCGAGTTTCAAAGAGGTTGCGCGCGTGAGCTTCCCCTATGGACTTCCCTATGGTTTCCACGGCTGCTGGATTCCGAAAAAGATTTGA
Protein:  
MAAYHPYRPMLCTVPNAPFLLSASTSGQIFHNISMTKVRRIRCVKAALDCGTAKLCAWTNVQREHWEGDLAVEGNLPAWLNGTYLRNGPGLWDVGEHSFHHIFDGYATLVRISFNQGRATGAHRLIQSEAYKAARTHGRPLHREFSSLCPRKPGSLLDRVRNIVGLSSGTALSDNANVSVLPLGDGRVICLTETTKSSVLIDPDTLDTIGKFHFTDRLWGLLQSTHPVVTPTEFLTLLPDLFRRGHRVVRMAAGSNERKVLGRVHCRGGLAPGWVHSFAVTENYIIVPEMPLRYSVTGVLKSELTPWYIFDWVPESGSYMHVVCRSTGKTVASVEVPPFMALHFINAYEQGDDDGGTGVIIADCCEYYADPAIIEALALHRLRSPGINKDAFPDARVARFRIPLDGSARGELETVVDPDAHGRGVELCSINPAYQGKEYRYVYACGARRPCNFFNSLTKIDLAEKGAKNWYEAGSVPSEPFFVARPGGTNEDDGVVISIVSTVEGEGYALVLDAASFKEVARVSFPYGLPYGFHGCWIPKKI